Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gm29667-201ENSMUST00000190817 490 ntBASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga11Q91XY8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm12485-201ENSMUST00000119641 291 ntBASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm5279-201ENSMUST00000199575 745 ntBASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm5186-201ENSMUST00000218781 920 ntBASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm9797-201ENSMUST00000052902 613 ntBASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhga11Q91XY8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhga11Q91XY8 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms