Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhga4Q91XY4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhga4Q91XY4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhga4Q91XY4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga4Q91XY4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms