Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm29705-201ENSMUST00000212598 474 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ndc1Q8VCB1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Grk6-205ENSMUST00000224653 2976 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm13392-201ENSMUST00000117708 150 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm17420-201ENSMUST00000164753 153 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Gm6007-201ENSMUST00000208170 823 ntBASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ndc1Q8VCB1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.46□□□□□ -0.42
Ndc1Q8VCB1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ndc1Q8VCB1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms