Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lsm1Q8VC85 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm1Q8VC85 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm1Q8VC85 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms