Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc9Q8VC31 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc9Q8VC31 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc9Q8VC31 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Gm15590-201ENSMUST00000078419 552 ntBASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc9Q8VC31 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Gm2128-201ENSMUST00000108009 2560 ntBASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Gm4899-201ENSMUST00000178708 719 ntBASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms