Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps39Q8R5L3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vps39Q8R5L3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm22189-201ENSMUST00000103822 86 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm14057-201ENSMUST00000120631 482 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm19220-201ENSMUST00000222682 803 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Vps39Q8R5L3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms