Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm25948-201ENSMUST00000175334 112 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm27772-201ENSMUST00000184900 187 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm43474-201ENSMUST00000196415 774 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nup35Q8R4R6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gm25911-201ENSMUST00000157621 56 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nup35Q8R4R6 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.75□□□□□ -0.69
Nup35Q8R4R6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nup35Q8R4R6 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms