Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm15678-201ENSMUST00000117573 960 ntBASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm18889-201ENSMUST00000174284 929 ntBASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm27494-201ENSMUST00000184735 189 ntBASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm33320-201ENSMUST00000192232 530 ntBASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccdc58Q8R3Q6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Mir1895-201ENSMUST00000122615 79 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Gm10175-201ENSMUST00000086013 645 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc58Q8R3Q6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms