Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Zcchc9Q8R1J3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Mir8109-201ENSMUST00000184375 117 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Zcchc9Q8R1J3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm27243-201ENSMUST00000183964 521 ntBASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm38266-201ENSMUST00000194931 421 ntBASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Zcchc9Q8R1J3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Zcchc9Q8R1J3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms