Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Atf7Q8R0S1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Gm23984-201ENSMUST00000157139 203 ntBASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Atf7Q8R0S1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Gm44069-201ENSMUST00000204898 506 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Atf7Q8R0S1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.55■□□□□ 0.08
Atf7Q8R0S1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Atf7Q8R0S1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms