Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc17Q8CE13 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.72□□□□□ -0.21
Ccdc17Q8CE13 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc17Q8CE13 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm25261-201ENSMUST00000157416 134 ntBASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm29396-201ENSMUST00000185659 716 ntBASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm37497-201ENSMUST00000195830 798 ntBASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Gm17330-201ENSMUST00000221047 165 ntBASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc17Q8CE13 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Ccdc17Q8CE13 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm15370-201ENSMUST00000117158 253 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12403-201ENSMUST00000121384 959 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc17Q8CE13 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc17Q8CE13 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms