Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm26956-201ENSMUST00000182176 986 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim52Q8CDV4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm31256-201ENSMUST00000194705 506 ntBASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim52Q8CDV4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm23270-201ENSMUST00000104055 131 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Mir339-201ENSMUST00000083659 96 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim52Q8CDV4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.15■□□□□ 0.18
Trim52Q8CDV4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms