Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc87Q8CDL9 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc87Q8CDL9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc87Q8CDL9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc87Q8CDL9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 AC165157.4-201ENSMUST00000220587 139 ntBASIC14□□□□□ -0.17
Ccdc87Q8CDL9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc87Q8CDL9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms