Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm27622-201ENSMUST00000183779 60 ntBASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm5312-201ENSMUST00000203728 547 ntBASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm5779-201ENSMUST00000218467 910 ntBASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Lysmd4Q8CC84 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Gm18905-201ENSMUST00000205454 928 ntBASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lysmd4Q8CC84 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Mir449b-201ENSMUST00000104833 80 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm25144-201ENSMUST00000179561 110 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm25352-201ENSMUST00000179815 110 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm43703-201ENSMUST00000200523 763 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Chchd1-203ENSMUST00000224633 557 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm24447-201ENSMUST00000083977 338 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms