Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trim9Q8C7M3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Gm6745-201ENSMUST00000199216 526 ntBASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim9Q8C7M3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm16202-201ENSMUST00000117532 544 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm7287-201ENSMUST00000205267 602 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim9Q8C7M3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim9Q8C7M3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms