Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc60Q8C4J0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Gm11618-201ENSMUST00000117946 267 ntBASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc60Q8C4J0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm12203-201ENSMUST00000118235 598 ntBASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm12209-201ENSMUST00000120089 596 ntBASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Gm6091-201ENSMUST00000098307 165 ntBASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc60Q8C4J0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Gm27847-201ENSMUST00000183711 107 ntBASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Gm27375-201ENSMUST00000183799 107 ntBASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.8■□□□□ 0.28
Ccdc60Q8C4J0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms