Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rft1Q8C3B8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm15393-201ENSMUST00000120499 219 ntBASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm18027-201ENSMUST00000218947 619 ntBASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Syt7-204ENSMUST00000223586 1344 ntBASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rft1Q8C3B8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Pck2-205ENSMUST00000226352 2784 ntBASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Gm12585-201ENSMUST00000117307 290 ntBASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.79□□□□□ -0.52
Rft1Q8C3B8 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.79□□□□□ -0.52
Rft1Q8C3B8 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms