Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 Gm6039-201ENSMUST00000121667 1250 ntBASIC17.4■□□□□ 0.38
Cps1Q8C196 Gm27627-201ENSMUST00000183644 150 ntBASIC17.4■□□□□ 0.38
Cps1Q8C196 Gm3508-201ENSMUST00000186012 792 ntBASIC17.4■□□□□ 0.38
Cps1Q8C196 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC17.4■□□□□ 0.38
Cps1Q8C196 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.4■□□□□ 0.38
Cps1Q8C196 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cps1Q8C196 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Cps1Q8C196 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cps1Q8C196 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC17.39■□□□□ 0.37
Cps1Q8C196 H2-Q3-201ENSMUST00000172583 608 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm29615-201ENSMUST00000185371 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28224-201ENSMUST00000186078 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm29001-201ENSMUST00000186177 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28292-201ENSMUST00000186593 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28101-201ENSMUST00000187608 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm29076-201ENSMUST00000187689 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28302-201ENSMUST00000187931 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28646-201ENSMUST00000188220 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28205-201ENSMUST00000189177 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm29032-201ENSMUST00000189797 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm28695-201ENSMUST00000190300 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm37448-201ENSMUST00000192795 697 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cps1Q8C196 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.39■□□□□ 0.37
Cps1Q8C196 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cps1Q8C196 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.38■□□□□ 0.37
Cps1Q8C196 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Mir219a-1-201ENSMUST00000083621 110 ntBASIC17.38■□□□□ 0.37
Cps1Q8C196 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.38■□□□□ 0.37
Cps1Q8C196 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cps1Q8C196 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cps1Q8C196 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Mir6546-201ENSMUST00000184460 62 ntBASIC17.37■□□□□ 0.37
Cps1Q8C196 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Gm10179-201ENSMUST00000086233 688 ntBASIC17.37■□□□□ 0.37
Cps1Q8C196 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Cps1Q8C196 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cps1Q8C196 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms