Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trerf1Q8BXJ2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Gm37917-201ENSMUST00000194711 392 ntBASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Gm19220-201ENSMUST00000222682 803 ntBASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Gm15823-201ENSMUST00000064305 670 ntBASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trerf1Q8BXJ2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm5279-201ENSMUST00000199575 745 ntBASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Trerf1Q8BXJ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trerf1Q8BXJ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms