Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4Q8BQZ5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm15770-201ENSMUST00000117498 584 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm26464-201ENSMUST00000157094 305 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4Q8BQZ5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gm11524-201ENSMUST00000119349 807 ntBASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gm18307-201ENSMUST00000206864 949 ntBASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4Q8BQZ5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms