Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VmacQ8BP01 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
VmacQ8BP01 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
VmacQ8BP01 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.17■□□□□ 0.02
VmacQ8BP01 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.17■□□□□ 0.02
VmacQ8BP01 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VmacQ8BP01 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC15.16■□□□□ 0.02
VmacQ8BP01 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm11424-201ENSMUST00000121929 829 ntBASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm7561-201ENSMUST00000211203 886 ntBASIC15.16■□□□□ 0.02
VmacQ8BP01 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VmacQ8BP01 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.16■□□□□ 0.02
VmacQ8BP01 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VmacQ8BP01 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm24644-201ENSMUST00000157114 139 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm27847-201ENSMUST00000183711 107 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm27375-201ENSMUST00000183799 107 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm27839-201ENSMUST00000184242 106 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.15■□□□□ 0.02
VmacQ8BP01 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VmacQ8BP01 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VmacQ8BP01 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VmacQ8BP01 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VmacQ8BP01 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VmacQ8BP01 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VmacQ8BP01 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.14■□□□□ 0.01
VmacQ8BP01 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VmacQ8BP01 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms