Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim6Q8BGE7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Matn2-203ENSMUST00000226766 3252 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Gm15678-201ENSMUST00000117573 960 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim6Q8BGE7 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim6Q8BGE7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim6Q8BGE7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms