Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Gm18041-201ENSMUST00000218210 618 ntBASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4bQ8BGE6 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm14350-201ENSMUST00000116642 640 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm7287-201ENSMUST00000205267 602 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4bQ8BGE6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm38671-201ENSMUST00000200573 130 ntBASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Atg4bQ8BGE6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms