Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Usp6nlQ80XC3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Acot6-202ENSMUST00000222921 3622 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Snord83b-201ENSMUST00000104546 94 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Usp6nlQ80XC3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Gm6458-201ENSMUST00000211573 635 ntBASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Usp6nlQ80XC3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Usp6nlQ80XC3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms