Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Gm8227-201ENSMUST00000223306 571 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prpf40bQ80W14 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm15370-201ENSMUST00000117158 253 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm13786-201ENSMUST00000122371 333 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm16505-201ENSMUST00000179981 232 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm6621-201ENSMUST00000193251 772 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Itm2b-204ENSMUST00000228637 783 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Mir497b-201ENSMUST00000093601 125 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Prpf40bQ80W14 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Gm5687-201ENSMUST00000118252 640 ntBASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Gm5161-201ENSMUST00000075243 853 ntBASIC15.22■□□□□ 0.03
Prpf40bQ80W14 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Prpf40bQ80W14 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Gm25668-201ENSMUST00000157700 129 ntBASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Gm26927-201ENSMUST00000182385 965 ntBASIC15.21■□□□□ 0.03
Prpf40bQ80W14 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms