Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Prpf38bQ80SY5 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm24255-201ENSMUST00000104481 128 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm29396-201ENSMUST00000185659 716 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Snora73a-201ENSMUST00000082453 205 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm13615-201ENSMUST00000120242 1612 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Prpf38bQ80SY5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm16505-201ENSMUST00000179981 232 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm7593-201ENSMUST00000187246 644 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm38223-201ENSMUST00000194484 695 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm19324-201ENSMUST00000213229 1169 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm3222-201ENSMUST00000071282 990 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf38bQ80SY5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.83□□□□□ -0.19
Prpf38bQ80SY5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms