Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm13342-201ENSMUST00000121055 207 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm7584-201ENSMUST00000175829 940 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm43133-201ENSMUST00000197472 463 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.23□□□□□ -0.45
Pif1Q80SX8 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Pif1Q80SX8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.22□□□□□ -0.45
Pif1Q80SX8 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.22□□□□□ -0.45
Pif1Q80SX8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.22□□□□□ -0.45
Pif1Q80SX8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Pif1Q80SX8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.21□□□□□ -0.45
Pif1Q80SX8 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms