Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh8Q7TSK3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh8Q7TSK3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh8Q7TSK3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm11618-201ENSMUST00000117946 267 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm45880-201ENSMUST00000213041 853 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Olfr582-201ENSMUST00000098212 960 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms