Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.12□□□□□ -0.63
Rif1Q6PR54 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.12□□□□□ -0.63
Rif1Q6PR54 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 BC037039-201ENSMUST00000192003 2205 ntBASIC11.12□□□□□ -0.63
Rif1Q6PR54 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rif1Q6PR54 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm25700-201ENSMUST00000177693 110 ntBASIC11.11□□□□□ -0.63
Rif1Q6PR54 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.11□□□□□ -0.63
Rif1Q6PR54 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm15036-201ENSMUST00000118880 400 ntBASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm2546-201ENSMUST00000182630 991 ntBASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.11□□□□□ -0.63
Rif1Q6PR54 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rif1Q6PR54 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm37246-201ENSMUST00000192665 835 ntBASIC11.1□□□□□ -0.63
Rif1Q6PR54 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm45212-201ENSMUST00000205831 3403 ntBASIC11.1□□□□□ -0.63
Rif1Q6PR54 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms