Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nudcd1Q6PIP5 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm6007-201ENSMUST00000208170 823 ntBASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nudcd1Q6PIP5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Snora73a-201ENSMUST00000082453 205 ntBASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nudcd1Q6PIP5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms