Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Scaf4Q6PFF0 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Scaf4Q6PFF0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Gm24447-201ENSMUST00000083977 338 ntBASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Scaf4Q6PFF0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Pck2-205ENSMUST00000226352 2784 ntBASIC13□□□□□ -0.33
Scaf4Q6PFF0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm38037-201ENSMUST00000192600 1624 ntBASIC13□□□□□ -0.33
Scaf4Q6PFF0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm27321-201ENSMUST00000185021 205 ntBASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm44344-201ENSMUST00000200287 129 ntBASIC13□□□□□ -0.33
Scaf4Q6PFF0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms