Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm44608-201ENSMUST00000206827 855 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Gm18057-201ENSMUST00000208220 503 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Daam2-202ENSMUST00000224595 1926 ntBASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rnf220Q6PDX6 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf220Q6PDX6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm15957-201ENSMUST00000118893 974 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm10175-201ENSMUST00000086013 645 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf220Q6PDX6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms