Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm15198-201ENSMUST00000117283 177 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm45880-201ENSMUST00000213041 853 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Hmgb4Q6P8W9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hmgb4Q6P8W9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hmgb4Q6P8W9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm8213-201ENSMUST00000118191 441 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm12403-201ENSMUST00000121384 959 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hmgb4Q6P8W9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms