Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Krt42Q6IFX2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Krt42Q6IFX2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Krt42Q6IFX2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Gm17271-201ENSMUST00000165535 355 ntBASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.51□□□□□ -0.25
Krt42Q6IFX2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.51□□□□□ -0.25
Krt42Q6IFX2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Rprl2-201ENSMUST00000157150 290 ntBASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Krt42Q6IFX2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms