Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Gm9996-201ENSMUST00000070359 913 ntBASIC15.61■□□□□ 0.09
Col11a2Q64739 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Col11a2Q64739 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.61■□□□□ 0.09
Col11a2Q64739 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.61■□□□□ 0.09
Col11a2Q64739 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Col11a2Q64739 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.61■□□□□ 0.09
Col11a2Q64739 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.61■□□□□ 0.09
Col11a2Q64739 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Col11a2Q64739 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.6■□□□□ 0.09
Col11a2Q64739 AC159103.1-201ENSMUST00000228325 429 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Col11a2Q64739 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm37246-201ENSMUST00000192665 835 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Gm18038-201ENSMUST00000197900 485 ntBASIC15.6■□□□□ 0.09
Col11a2Q64739 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Col11a2Q64739 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC15.59■□□□□ 0.09
Col11a2Q64739 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a2Q64739 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC15.59■□□□□ 0.09
Col11a2Q64739 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.59■□□□□ 0.09
Col11a2Q64739 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a2Q64739 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC15.59■□□□□ 0.09
Col11a2Q64739 Gm270-201ENSMUST00000223010 976 ntBASIC15.59■□□□□ 0.09
Col11a2Q64739 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC15.59■□□□□ 0.09
Col11a2Q64739 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Col11a2Q64739 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Col11a2Q64739 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a2Q64739 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a2Q64739 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a2Q64739 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a2Q64739 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Col11a2Q64739 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Col11a2Q64739 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.58■□□□□ 0.08
Col11a2Q64739 Gm28071-201ENSMUST00000190355 478 ntBASIC15.58■□□□□ 0.08
Col11a2Q64739 Gm45550-201ENSMUST00000209380 946 ntBASIC15.58■□□□□ 0.08
Col11a2Q64739 AC153505.1-201ENSMUST00000218819 1071 ntBASIC15.58■□□□□ 0.08
Col11a2Q64739 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.58■□□□□ 0.08
Col11a2Q64739 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Col11a2Q64739 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a2Q64739 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Col11a2Q64739 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col11a2Q64739 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Col11a2Q64739 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a2Q64739 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Col11a2Q64739 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Col11a2Q64739 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms