Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Clcn1Q64347 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.72■□□□□ 0.27
Clcn1Q64347 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm16570-201ENSMUST00000161951 436 ntBASIC16.72■□□□□ 0.27
Clcn1Q64347 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Mir7070-201ENSMUST00000183657 86 ntBASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm27320-201ENSMUST00000184892 109 ntBASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.72■□□□□ 0.27
Clcn1Q64347 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.72■□□□□ 0.27
Clcn1Q64347 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Mir433-201ENSMUST00000093564 124 ntBASIC16.72■□□□□ 0.27
Clcn1Q64347 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Clcn1Q64347 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Gm12997-201ENSMUST00000120207 640 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Gm14381-201ENSMUST00000122105 414 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Mospd4-201ENSMUST00000180618 576 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn1Q64347 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.71■□□□□ 0.27
Clcn1Q64347 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.71■□□□□ 0.27
Clcn1Q64347 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Clcn1Q64347 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.71■□□□□ 0.26
Clcn1Q64347 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Clcn1Q64347 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Clcn1Q64347 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Clcn1Q64347 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
Clcn1Q64347 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Gm18244-201ENSMUST00000219747 1566 ntBASIC16.7■□□□□ 0.26
Clcn1Q64347 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Clcn1Q64347 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.7■□□□□ 0.26
Clcn1Q64347 Gm3786-201ENSMUST00000202659 378 ntBASIC16.7■□□□□ 0.26
Clcn1Q64347 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.7■□□□□ 0.26
Clcn1Q64347 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Clcn1Q64347 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms