Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Trim27Q62158 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim27Q62158 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim27Q62158 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim27Q62158 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm45643-201ENSMUST00000211364 1484 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Mir686-201ENSMUST00000102174 109 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm10156-201ENSMUST00000122364 462 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm6244-201ENSMUST00000178732 841 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Gm7067-201ENSMUST00000207698 1249 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trim27Q62158 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim27Q62158 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim27Q62158 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.18■□□□□ 0.18
Trim27Q62158 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.17■□□□□ 0.18
Trim27Q62158 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.17■□□□□ 0.18
Trim27Q62158 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim27Q62158 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim27Q62158 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim27Q62158 Gm10012-201ENSMUST00000078252 192 ntBASIC16.17■□□□□ 0.18
Trim27Q62158 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Trim27Q62158 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim27Q62158 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trim27Q62158 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim27Q62158 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim27Q62158 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim27Q62158 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim27Q62158 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Gm13123-201ENSMUST00000122173 492 ntBASIC16.16■□□□□ 0.18
Trim27Q62158 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Gm8810-201ENSMUST00000172895 754 ntBASIC16.16■□□□□ 0.18
Trim27Q62158 Gm28693-202ENSMUST00000190758 331 ntBASIC16.16■□□□□ 0.18
Trim27Q62158 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.16■□□□□ 0.18
Trim27Q62158 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.16■□□□□ 0.18
Trim27Q62158 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.16■□□□□ 0.18
Trim27Q62158 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim27Q62158 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms