Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.74□□□□□ -0.21
Smarcd1Q61466 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Smarcd1Q61466 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.73□□□□□ -0.21
Smarcd1Q61466 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Gm26185-201ENSMUST00000157692 266 ntBASIC13.73□□□□□ -0.21
Smarcd1Q61466 Gm5370-201ENSMUST00000187187 574 ntBASIC13.73□□□□□ -0.21
Smarcd1Q61466 Gm37424-201ENSMUST00000191727 561 ntBASIC13.73□□□□□ -0.21
Smarcd1Q61466 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.73□□□□□ -0.21
Smarcd1Q61466 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smarcd1Q61466 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.72□□□□□ -0.21
Smarcd1Q61466 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.72□□□□□ -0.21
Smarcd1Q61466 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm27514-201ENSMUST00000183692 110 ntBASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcd1Q61466 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.71□□□□□ -0.21
Smarcd1Q61466 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms