Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.31□□□□□ -0.28
Six4Q61321 Gm19931-201ENSMUST00000198920 368 ntBASIC13.31□□□□□ -0.28
Six4Q61321 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.31□□□□□ -0.28
Six4Q61321 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.31□□□□□ -0.28
Six4Q61321 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Six4Q61321 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six4Q61321 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.3□□□□□ -0.28
Six4Q61321 Gm17150-201ENSMUST00000165577 381 ntBASIC13.3□□□□□ -0.28
Six4Q61321 Gm27847-201ENSMUST00000183711 107 ntBASIC13.3□□□□□ -0.28
Six4Q61321 Gm27375-201ENSMUST00000183799 107 ntBASIC13.3□□□□□ -0.28
Six4Q61321 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.3□□□□□ -0.28
Six4Q61321 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.3□□□□□ -0.28
Six4Q61321 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Six4Q61321 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six4Q61321 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.29□□□□□ -0.28
Six4Q61321 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Six4Q61321 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.29□□□□□ -0.28
Six4Q61321 Gm8805-201ENSMUST00000117848 313 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.29□□□□□ -0.28
Six4Q61321 Gm24644-201ENSMUST00000157114 139 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Gm27331-201ENSMUST00000183705 60 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Gm28693-202ENSMUST00000190758 331 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Gm37922-201ENSMUST00000195596 455 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.29□□□□□ -0.28
Six4Q61321 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Gm18041-201ENSMUST00000218210 618 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.29□□□□□ -0.28
Six4Q61321 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Six4Q61321 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.29□□□□□ -0.28
Six4Q61321 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six4Q61321 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six4Q61321 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Six4Q61321 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.28□□□□□ -0.28
Six4Q61321 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six4Q61321 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.28□□□□□ -0.28
Six4Q61321 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six4Q61321 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six4Q61321 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Six4Q61321 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six4Q61321 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Six4Q61321 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms