Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Shroom1Q5SX79 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm22018-201ENSMUST00000104357 131 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm43118-201ENSMUST00000199149 775 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm45880-201ENSMUST00000213041 853 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm9257-201ENSMUST00000221254 232 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.04□□□□□ -0.16
Shroom1Q5SX79 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gm14350-201ENSMUST00000116642 640 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gm13369-201ENSMUST00000119442 987 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Olfr582-201ENSMUST00000098212 960 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Shroom1Q5SX79 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms