Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Mir5126-201ENSMUST00000175513 77 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm17971-201ENSMUST00000190239 806 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm45747-201ENSMUST00000212203 999 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gm10154-201ENSMUST00000084445 354 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav3-3Q5R1C3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.9□□□□□ -0.83
Trav3-3Q5R1C3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trav3-3Q5R1C3 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trav3-3Q5R1C3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms