Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.31□□□□□ -0.28
Bdp1Q571C7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Bdp1Q571C7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm25604-201ENSMUST00000158359 133 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm27627-201ENSMUST00000183644 150 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Ginm1-202ENSMUST00000065124 300 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Mir181d-201ENSMUST00000102383 72 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm13937-201ENSMUST00000121000 988 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm10774-201ENSMUST00000188689 204 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Gm2517-201ENSMUST00000215651 348 ntBASIC13.3□□□□□ -0.28
Bdp1Q571C7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Bdp1Q571C7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm15711-201ENSMUST00000118889 535 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm12501-201ENSMUST00000119163 529 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Gm45856-201ENSMUST00000212752 416 ntBASIC13.29□□□□□ -0.28
Bdp1Q571C7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Bdp1Q571C7 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms