Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Srrm1Q52KI8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm4909-201ENSMUST00000118749 794 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm14208-201ENSMUST00000119645 678 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm5523-201ENSMUST00000180415 997 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Mir6927-201ENSMUST00000184494 71 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm31256-201ENSMUST00000194705 506 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm29787-201ENSMUST00000222129 849 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Srrm1Q52KI8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Srrm1Q52KI8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Gm13570-201ENSMUST00000140763 309 ntBASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Srrm1Q52KI8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms