Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm6745-201ENSMUST00000199216 526 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm42550-201ENSMUST00000201553 960 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Syne3Q4FZC9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm38223-201ENSMUST00000194484 695 ntBASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm6180-201ENSMUST00000065243 498 ntBASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Syne3Q4FZC9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Syne3Q4FZC9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Gm38144-201ENSMUST00000192790 465 ntBASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Syne3Q4FZC9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Syne3Q4FZC9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms