Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm8927-201ENSMUST00000181978 981 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm3222-201ENSMUST00000071282 990 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm9719-201ENSMUST00000162765 543 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mir6990-201ENSMUST00000183724 91 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm43125-201ENSMUST00000201724 730 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm6916-202ENSMUST00000205523 195 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm44771-201ENSMUST00000206975 626 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim40Q3UWA4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim40Q3UWA4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms