Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm44608-201ENSMUST00000206827 855 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cks1brtQ3UNC9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Map1b-203ENSMUST00000223725 2669 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm15372-201ENSMUST00000120729 834 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm16026-204ENSMUST00000162652 683 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm5682-201ENSMUST00000173402 505 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm43935-201ENSMUST00000203569 1050 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 AC153889.1-201ENSMUST00000219257 330 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 AC124569.2-201ENSMUST00000225998 818 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 AC123645.1-201ENSMUST00000228469 605 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm10154-201ENSMUST00000084445 354 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms