Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim43aQ3TL54 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Gm27772-201ENSMUST00000184900 187 ntBASIC14□□□□□ -0.17
Trim43aQ3TL54 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim43aQ3TL54 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43aQ3TL54 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Mir6977-201ENSMUST00000184960 64 ntBASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Gm19931-201ENSMUST00000198920 368 ntBASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Gm18905-201ENSMUST00000205454 928 ntBASIC13.99□□□□□ -0.17
Trim43aQ3TL54 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43aQ3TL54 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms