Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm12241-201ENSMUST00000118330 726 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm14723-201ENSMUST00000118686 215 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm14704-201ENSMUST00000120300 874 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Olfr582-201ENSMUST00000098212 960 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.64□□□□□ -0.39
Hoxc4Q08624 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxc4Q08624 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm8738-201ENSMUST00000172606 329 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm27516-201ENSMUST00000184237 98 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.63□□□□□ -0.39
Hoxc4Q08624 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxc4Q08624 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms