Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 AC133602.1-201ENSMUST00000227510 509 ntBASIC18.32■□□□□ 0.52
Xrn1P97789 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Xrn1P97789 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.32■□□□□ 0.52
Xrn1P97789 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Xrn1P97789 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.32■□□□□ 0.52
Xrn1P97789 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Xrn1P97789 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Gm12501-201ENSMUST00000119163 529 ntBASIC18.32■□□□□ 0.52
Xrn1P97789 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Xrn1P97789 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Xrn1P97789 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 Gm15432-201ENSMUST00000121106 195 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 Gm45909-201ENSMUST00000212413 1031 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 Gm4797-201ENSMUST00000219075 1283 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC18.31■□□□□ 0.52
Xrn1P97789 AC129219.2-201ENSMUST00000224324 701 ntBASIC18.31■□□□□ 0.52
Xrn1P97789 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Xrn1P97789 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Xrn1P97789 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Xrn1P97789 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC18.31■□□□□ 0.52
Xrn1P97789 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Xrn1P97789 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.3■□□□□ 0.52
Xrn1P97789 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Mir6958-201ENSMUST00000184207 73 ntBASIC18.3■□□□□ 0.52
Xrn1P97789 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.3■□□□□ 0.52
Xrn1P97789 Gm270-201ENSMUST00000223010 976 ntBASIC18.3■□□□□ 0.52
Xrn1P97789 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC18.3■□□□□ 0.52
Xrn1P97789 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Xrn1P97789 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Xrn1P97789 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC18.29■□□□□ 0.52
Xrn1P97789 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC18.29■□□□□ 0.52
Xrn1P97789 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.29■□□□□ 0.52
Xrn1P97789 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC18.29■□□□□ 0.52
Xrn1P97789 AC153954.1-201ENSMUST00000216959 255 ntBASIC18.29■□□□□ 0.52
Xrn1P97789 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Gm45342-201ENSMUST00000210903 1363 ntBASIC18.29■□□□□ 0.52
Xrn1P97789 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Xrn1P97789 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC18.29■□□□□ 0.52
Xrn1P97789 Gm21811-201ENSMUST00000096485 930 ntBASIC18.29■□□□□ 0.52
Xrn1P97789 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Xrn1P97789 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Xrn1P97789 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Xrn1P97789 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC18.29■□□□□ 0.52
Xrn1P97789 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC18.28■□□□□ 0.52
Xrn1P97789 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms