Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Gm9678-201ENSMUST00000198979 1149 ntBASIC16.47■□□□□ 0.23
Nkx2-3P97334 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.47■□□□□ 0.23
Nkx2-3P97334 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Gm5363-201ENSMUST00000211927 938 ntBASIC16.47■□□□□ 0.23
Nkx2-3P97334 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.47■□□□□ 0.23
Nkx2-3P97334 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.46■□□□□ 0.23
Nkx2-3P97334 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 AC154262.2-201ENSMUST00000224310 2293 ntBASIC16.46■□□□□ 0.23
Nkx2-3P97334 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm12291-201ENSMUST00000121627 311 ntBASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm13097-201ENSMUST00000210722 397 ntBASIC16.46■□□□□ 0.23
Nkx2-3P97334 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Nkx2-3P97334 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Nkx2-3P97334 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Nkx2-3P97334 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC16.46■□□□□ 0.22
Nkx2-3P97334 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Gm11930-201ENSMUST00000117788 190 ntBASIC16.45■□□□□ 0.22
Nkx2-3P97334 B9d1os-201ENSMUST00000137010 674 ntBASIC16.45■□□□□ 0.22
Nkx2-3P97334 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Mir5120-201ENSMUST00000175020 78 ntBASIC16.45■□□□□ 0.22
Nkx2-3P97334 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Rps4l-202ENSMUST00000204242 789 ntBASIC16.45■□□□□ 0.22
Nkx2-3P97334 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.45■□□□□ 0.22
Nkx2-3P97334 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.45■□□□□ 0.22
Nkx2-3P97334 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Nkx2-3P97334 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms